p5-Bio-Variation

bioperl variation-related functionality

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  1. Package version
    p5-Bio-Variation-1.7.5
  2. Maintainer
    The OpenBSD ports mailing-list

Bio::Variation name space contains modules to store sequence variation
information as differences between the reference sequence and changes
sequences. Also included are classes to write out and recrete objects from
EMBL-like flat files and XML. Lastly, there are simple classes to calculate
values for sequence change objects.

  • biology/p5-Bio-DB-EMBL
  • biology/p5-Bio-DB-NCBIHelper
  • STEM->=1.7.7:biology/bioperl
  • devel/p5-IO-String
  • textproc/p5-XML-Twig
  • STEM->=0.4:textproc/p5-XML-Writer